Neonatal Sepsis

Last updated: April 1, 2026

Neonatal sepsis is a life-threatening bloodstream infection that affects infants < 28 days old.

Definition of terms

TermDefinition
Suspected sepsisPresence of sepsis risk factors in the baby, or findings suggesting sepsis regardless of whether there are symptoms or not.
Clinical sepsisClinical features and lab findings are present, but fail to show causative organisms
Proven sepsisClinical features and lab findings are present, and demonstrated organisms in cultures taken from a sterile field
Sepsis criteriaSIRS + source of infection (suspected or present)
Severe sepsisSepsis with acute organ dysfunction (including hypoperfusion and hypotension) caused by sepsis
Septic shockSepsis with persistent or refractory tissue hypoperfusion or hypotension despite adequate fluid resuscitation

SIRS criteria (≥ 2 required, 1 must be abnormal temperature or leukocyte count)

  • Temperature > 38.5 C or < 36 C
  • Abnormal leucocyte count OR > 10% band
  • Tachycardia, or Bradycardia (if < 1 year)
  • Tachypnea, or Mechanical ventilation (related to an acute process)

Early onset vs. late onset neonatal sepsis

Early-onset sepsis (EOS)Late-onset sepsis (LOS)
Time of onset≤ 72 hours≥ 72 hours
Source of infectionAntenatal (maternal) genitourinary tractPost-natal environment (healthcare workers, caregivers)
PresentationPneumonia (respiratory distress) is the most common, fulminant multisystemMeningitis is frequent, slowly progressive
Causative organismsGroup B streptococci, Escherichia coli (common in preterm), CoNS (Staphylococcus epidermidis), Haemophilus influenzae, Listeria monocytogenesCoNS (> 50%), Staphylococcus aureus, Haemophilus influenzae, Klebsiella, Pseudomonas, Viruses, Candida

Risk factors for early-onset sepsis

CategoryRisk factors
Maternal factorsProlonged rupture of membranes > 18 hours, Intrapartum maternal fever (> 38 C), Chorioamnionitis, UTI, GBS colonization, Foul-smelling and/or meconium-stained liquor, single unclean or > 3 sterile vaginal examinations during labour
Fetal factorsPrematurity, low birth weight, difficult delivery, e.g., prolonged 1st and 2nd stage of labour > 24 hours, perinatal asphyxia (APGAR < 4 at 1 minute)

Risk factors for late-onset sepsis

CategoryRisk factors
HospitalizationICU admission and instrumentation (umbilical catheter, endotracheal intubation, IV catheter)
Congenital malformationSpina bifida, tracheo-esophageal fistula, and congenital heart disease
Sever illnessImmunodeficiency, Malnutrition

Note: Premature and LBW neonates are more susceptible to both EOS and LOS due to:

  • Deficient immunity (IgG, opsonization, complement)
  • Immature epithelial barrier
  • Increased need for invasive devices (vascular access, endotracheal tube, feeding tubes, urinary tract catheters)

Classification of neonatal sepsis according to severity

ClassificationFeatures
Non-severe neonatal sepsisMovement only when stimulated, not feeding well on observation, temperature > 37 C or < 35.5 C, severe chest wall indrawing
Severe neonatal sepsisUnconscious, convulsions, unable to feed or poor feeding, apnoea, unable to cry/high-pitched cry, central cyanosis (SpO2 <90% or requiring oxygen), bulging fontanelles, persistent vomiting

Clinical presentation of neonatal sepsis

CategorySigns and symptoms
EarlyIrritability, respiratory distress with apnoeic attacks, lethargy, poor feeding, vomiting, unstable temperature (fever or hypothermia), poor moro and sucking reflexes
RespiratoryFast breathing, difficulty in breathing (expiratory grunting), Nasal flaring and intercostal/sternal retractions, apnoea (common in preterms), cyanosis (SpO2 < 90%)
CNSDifficulty sucking, irritability, lethargy, sleepiness, weak or high-pitched cry, convulsions, hypoactivity, hypotonic, bulging or tense fontanelles, body temperature regulation problems (hypothermia or hyperthermia)
CardiovascularBradycardia or tachycardia, hypotension, prolonged capillary refill time (> 3 seconds since blood is redistributed to maintain flow to the heart and brain)
GastrointestinalVomiting, difficulty sucking, diarrhea, abdominal distension, hepatosplenomegaly, jaundice
DermatologicalJaundice, cyanosis, cutis marmorata, pustules, abcess, petechiae, purpura, neonatal sclerema (hardening of the skin), skin mottling
  • Differentials
  • Investigations
    • Blood culture: This is the gold standard.
      • A negative blood culture does not exclude diagnosis ****
    • Complete blood count with Immature: total (I: T) ratio:
      • I: T ratio of > 0.18
      • Neutropenia/neutrophilia
      • Thrombocytopenia
      • Neutropenia has better specificity than neutrophilia as a marker of neonatal sepsis
    • CRP
      • Elevated (low sensitivity for EOS)
    • Procalcitonin
      • Elevated (higher sensitivity for EOS than CRP)
    • CSF culture: This is done in infants with positive blood culture and clinically considered meningitis. It is routinely performed in small children with late-onset sepsis.
    • CSF biochemical analysis
    • Urinalysis and urine culture: no need in EOS, but used in LOS
    • Chest X-ray: used in cases with respiratory symptoms to rule out pneumonia.
    • Cell surface markers
  • Supportive Treatment
    • Early transfer to the NICU for a critically ill neonate requiring cardiopulmonary support
    • Encourage breastfeeding, nasogastric tube feeds, or **intravenous fluids if feeding is not feasible
    • Monitor input/output charts
    • Transfusion of blood products if indicated
    • Oxygen therapy
      • If respiratory compromise or SpO2 < 90%
    • Keep warm if the temperature is < 35.5 C
    • Expose if the temperature is ≥ 38 C
    • Encourage KMC
    • Check for and prevent hypoglycemia (RBS)
      • Treat hypoglycemia if it cannot be tested for in severe neonatal sepsis
  • Definitive Treatment of Early-Onset Neonatal Sepsis
    • Penicillin/ampicillin + gentamicin
      • First-line
      • Targets GBS and L. monocytogenes
      • Gentamicin protects the penicillin against resistance.
    • 3rd and 4th generation cephalosporin, e.g. cefotaxime, if there is suspected Gram-negative meningitis
      • Ceftriaxone is not used since it can lead to hyperbilirubinemia and the serious precipitation of calcium-ceftriaxone crystals.
    • Metronidazole if there is suspected necrotizing enterocolitis
  • Definitive Treatment of Late-Onset Neonatal Sepsis
    • Flucloxacillin and Aminoglycoside
      • Targets Staphylcoccus aureus and gram-negative organisms.
      • Used if there is suspected staphylococcal septicemia, or neonates have signs of sepsis with skin pustules/abscesses or omphalitis
    • Vancomycin
      • Targets CoNS
    • 3rd gen cephalosporin, e.g. cefotaxime
      • If suspected GN meningitis
    • Meropenem
      • If the patient was previously on a 3rd-generation cephalosporin, or if there is local resistance
  • Preventin
    • Intrapartum prophylaxis for GBS-positive mothers
    • Limit the number of vaginal examinations and clean aseptic deliveries
    • Strict hygiene protocols in the NBU or NICU
    • Exclusive breastfeeding if possible
    • Maintain a clean and dry cord and isolate infectious babies

Duration of treatment

ConditionDuration of Treatment
Breastfeeding well2 days, PO treatment to complete 5 days
Skin infection3 days, PO treatment to complete 5 days
Clinical or radiological PneumoniaMinimum of 5 days
Severe neonatal sepsisMinimum of 7 days
GN bacteremia10 – 14 days
< 32/40 gestational age10 – 14 days
Uncomplicated GBS meningitisminimum 14 days, extend duration if focal complications
GN bacterial meningitisminimum 21 days, or for another 2 weeks after the first negative CSF culture

Newborn antibiotic doses for neonates < 7 days

AntibioticDoseFrequencyRoute
Penicillin (< 7 days50,000 IU/kg12 hourlyIV/IM
Penicillin (> 7 days)50,000 IU/kg6 hourlyIV/IM
Ampicillin/Flucloxacillin50mg/kg12 hourlyIV/IM
Gentamicin (< 2kg)3mg/kg24 hourlyIV/IM
Gentamicin (≥ 2kg)5 mg/kg24 hourlyIV/IM
Ceftriaxone50mg/kg24 hourlyIV/IM
Metronidazole7.5 mg/kg12 hourlyIM
Oral Amoxicillin50mg/kg (100mg/kg/day)12 hourlyPO

Gentamicin frequency

Gestational ageInterval
< 30 0 weeks48 hourly
30 0 – 34 6/7 weeks36 hourly
≥ 35 + 0 weeks24 hourly

Reference Intervals
Biochemistry
ACTHP: <80 ng/L
ALTP: 5–35 U/L
AlbuminP: 35–50 g/L
AldosteroneP: 100–500 pmol/L
Alk. phosphataseP: 30–130 U/L
α-AmylaseP: 0–180 IU/dL
α-FetoproteinS: <10 kU/L
Angiotensin IIP: 5–35 pmol/L
ADHP: 0.9–4.6 pmol/L
ASTP: 5–35 U/L
BicarbonateP: 24–30 mmol/L
BilirubinP: 3–17 μmol/L
BNPP: <50 ng/L
CRPP: <10 mg/L
CalcitoninP: <0.1 mcg/L
Calcium (ionized)P: 1.0–1.25 mmol/L
Calcium (total)P: 2.12–2.60 mmol/L
ChlorideP: 95–105 mmol/L
CholesterolP: <5.0 mmol/L
VLDLP: 0.128–0.645 mmol/L
LDLP: <2.0 mmol/L
HDLP: 0.9–1.93 mmol/L
Cortisol AMP: 450–700 nmol/L
Cortisol MidnightP: 80–280 nmol/L
CK ♂P: 25–195 U/L
CK ♀P: 25–170 U/L
CreatinineP: 70–100 μmol/L
FerritinP: 12–200 mcg/L
FolateS: 2.1 mcg/L
FSHP: 2–8 U/L ♂; >25 menopause
GGT ♂P: 11–51 U/L
GGT ♀P: 7–33 U/L
Glucose (fasting)P: 3.5–5.5 mmol/L
Growth hormoneP: <20 mu/L
HbA1C (DCCT)B: 4–6%
HbA1C (IFCC)B: 20–42 mmol/mol
Iron ♂S: 14–31 μmol/L
Iron ♀S: 11–30 μmol/L
Lactate (venous)P: 0.6–2.4 mmol/L
Lactate (arterial)P: 0.6–1.8 mmol/L
LDHP: 70–250 U/L
LHP: 3–16 U/L
MagnesiumP: 0.75–1.05 mmol/L
OsmolalityP: 278–305 mosmol/kg
PTHP: 0.8–8.5 pmol/L
PotassiumP: 3.5–5.3 mmol/L
Prolactin ♂P: <450 U/L
Prolactin ♀P: <600 U/L
PSAP: 0–4 mcg/mL
Protein (total)P: 60–80 g/L
Red cell folateB: 0.36–1.44 μmol/L
Renin (erect)P: 2.8–4.5 pmol/mL/h
Renin (recumbent)P: 1.1–2.7 pmol/mL/h
SodiumP: 135–145 mmol/L
TBGP: 7–17 mg/L
TSHP: 0.5–4.2 mU/L
T4P: 70–140 nmol/L
Free T4P: 9–22 pmol/L
TIBCS: 54–75 μmol/L
TriglyceridesP: 0.50–2.3 mmol/L
T3P: 1.2–3.0 nmol/L
Troponin TP: <0.1 mcg/L
Urate ♂P: 210–480 μmol/L
Urate ♀P: 150–390 μmol/L
UreaP: 2.5–6.7 mmol/L
Vitamin B12S: 0.13–0.68 nmol/L
Vitamin DS: 50 nmol/L
Arterial Blood Gases
pH7.35–7.45
PaCO₂4.7–6.0 kPa
PaO₂>10.6 kPa
Base excess±2 mmol/L
Urine
Cortisol (free)<280 nmol/24h
Hydroxyindole acetic acid16–73 μmol/24h
Hydroxymethylmandelic acid16–48 μmol/24h
Metanephrines0.03–0.69 μmol/mmol cr.
Osmolality350–1000 mosmol/kg
17-Oxogenic steroids ♂28–30 μmol/24h
17-Oxogenic steroids ♀21–66 μmol/24h
17-Oxosteroids ♂17–76 μmol/24h
17-Oxosteroids ♀14–59 μmol/24h
Phosphate (inorganic)15–50 mmol/24h
Potassium14–120 mmol/24h
Protein<150 mg/24h
Protein/creatinine ratio<3 mg/mmol
Sodium100–250 mmol/24h
Haematology
WCC4.0–11.0 ×10⁹/L
RBC ♂4.5–6.5 ×10¹²/L
RBC ♀3.9–5.6 ×10¹²/L
Hb ♂130–180 g/L
Hb ♀115–160 g/L
PCV ♂0.4–0.54 L/L
PCV ♀0.37–0.47 L/L
MCV76–96 fL
MCH27–32 pg
MCHC300–360 g/L
RDW11.6–14.6%
Neutrophils2.0–7.5 ×10⁹/L (40–75%)
Lymphocytes1.0–4.5 ×10⁹/L (20–45%)
Eosinophils0.04–0.44 ×10⁹/L (1–6%)
Basophils0–0.10 ×10⁹/L (0–1%)
Monocytes0.2–0.8 ×10⁹/L (2–10%)
Platelets150–400 ×10⁹/L
Reticulocytes0.8–2.0% / 25–100 ×10⁹/L
Prothrombin time10–14 s
APTT35–45 s
Paediatric
Pulse Rate (bpm)
Neonate140–160
Infant <1yr120–140
1–5 years110–130
5–12 years80–120
>12 years70–100
Respiratory Rate (tachypnoea)
0–2 months≥60/min
2–12 months≥50/min
1–5 years≥40/min
>5 years≥30/min
Blood Pressure (mmHg)
Term65/45
1 year75/50
4 years85/60
8 years95/65
10 years100/70
Weight Formulas
3–12 months(a + 9)/2 kg
1–6 years2a + 8 kg
>6 years(7a − 5)/2 kg
Haemoglobin (g/dL)
Term newborn13–20
1 month11–18
2 months10–15
1–2 years10–13
>2 years11–14
MUAC (6 months–5 years)
Obese>17.5 cm
Normal13.5–17.4 cm
At risk12.5–13.4 cm
Moderate malnutrition11.5–12.4 cm
Severe malnutrition<11.5 cm
Developmental Milestones
Social smile1.5 months
Head control4 months
Sits unsupported7 months
Crawls10 months
Stands unsupported10–12 months
Walks12–13 months
Talks18 months
CSF WBC (/mm³)
Term newborn0–25
>2 weeks0–5
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