Campylobacter and Helicobacter

Last updated: November 12, 2024
Table Of Contents

Helicobacter

  • Briefly describe Helicobacter
    • Previously classified under campylobacter
    • Encompasses and enterohepatic species
      • Gastric
        • Helicobacter pylori
        • Helicobacter heilmanni
      • Enterohepatic
        • Helicobacter hepaticus
    • Helicobater pylori infects humans, primates, and pigs, and is associated with:
      • gastritis
      • peptic ulcers
      • gastric adenocarcinoma, and
      • MALT B-cell lymphomas.
    • Helicobacter cinaedi affects humans and hamsters and causes:
      • gastroenteritis
      • septicemia and
      • proctocolitis.
    • Helicobacter fenneliae affects humans and causes:
      • gastroenteritis
      • septicemia and
      • proctocolitis
  • Briefly describe Helicobacter pylori
    • Helicobacter pylori is a GN curved rod.
    • It is spiral shaped, micro-aerophilic, highly motile (cockscrew motility) with lophotrichious flagella (2-6 sheathed unipolar flagellar).
    • It colonizes the stomach in around 50% of the population and is spread via the fecal-oral route. It is the main risk factor for Gastric and duodeal ulcers, Stomach cancer, Gastric MALToma. It produces oxidase, catalase and urease (positive)
    • Helicobacter pylori has the highest incidence of carriage in developing countries (70-90%) of the population and most <10 years of age.
    • Humans are the primary reservoir and colonization is believed to persist for life – Unless the host is specifically treated
    • Transmission is by the fecal-oral route.
    • It is found in 70-100% of patients with gastritis, gastric ulcers or duodenal ulcers.
      • Colonization appears to offer protection from GERD and adenocarcinomas of the lower oesophagus and cardia of the stomach.
    • Helicobacter pylori produces NH3 in more neutral microenvironment.
    • Vacuolating cytotoxin A(VacA) causes apoptosis in eukaryotic cells by producing large cytoplasmic vacules.
    • Cytotoxin-associated gene (cagA) resides in pathogenicity island and encodes a syringe-like structure (Type IV secretion system) that injects CagA protein in host epithelium.
      • CagA activates signal transduction molecules causing morphological and neoplastic changes (actin remodelling, host cell growth and inhibition of apoptosis).
      • CagA-negative strains are significantly less associated with gastric adenocarcinoma.
      • Cag genes also induce IL-8 production causing neutrophil chemoattraction and ROS production.
  • List the virulence factors associated with Helicobacter pylori
    • Multiple unipolar flagellae: motility and chemotaxis
    • Urease: neutralizes gastric acid, mucosal injury by ammonia
    • Outer membrane proteins (BabA, BabB, sabA): adhesion to gastric epithelial cells
    • VacA Exotoxin: promotes inflammation and gastric mucosal injury
    • Cytotoxin-associated gee (cagA): codes Type IV secretory system for Cag Proteins
    • Cag(A) proteins: promotes inflammation (Il-8) and carcinogenesis (actin remodelling, host cell growth and inhibition of apoptosis)
    • Protease: modifies gastric mucus reducing ability of acid to diffuse through
    • Mucinase: breaks down gastric mucus allowing the organism to penetrate and adhere to the epithelial cells
  • Briefly describe the pathogenesis Gastritis and Gastric Ulcers caused by Helicobacter pylori
    • Initial colonization is facilitated by:
      • Blockage of acid production (by bacterial acid-inhibotory proteins)
      • Neutralization of gastric acid (ammonia produced by urease activity)
    • Passes through gastric mucus
    • Adheres to gastric epithelial cells via multiple surface adhesion proteins (BabA, BabB, sabA)
    • Adhesion proteins aid with immune evasion
    • Localized tissue damage (urease byproducts, mucinase, phospholipases, and activity of VacA)
    • CagA stimulates IL-8 production and subsequent neutrophil chemoattraction
    • Release of proteases and ROS by neutrophils
    • Gastritis (Type B) and Gastric ulcers
  • Briefly describe the clinical features of Helicobacter Pylori
    • Gastritis: Inflammation of stomach lining with associated mucosal ijury; infiltration of neutrophils and mononuclear cells into the gastric mucosa
      • Acute gastritis: feeling of fullnes, N, V, and hypochlorhydria +/- recurrent upper abdominal pain, heart burn, anorexia
      • Chronic gastritis (Type B): Confined to the gastric antrum or pangastritis. Approximately 10-15% of chronic gastritis patients progress to PUD. Chronic gastritis also leads to replacement of normal gastric mucosa with fibrosis and proliferation of intestinal-type epithelium
    • Gastric and duodenual ulcers
      • Ulcers occur at sites of intense inflammation commonly at the junction between the corpus and antrum (in gastric ulcert) and proximal duodenum (duodenal ulcers)H.pylori is responsible for 85% of gastric and 95% of duodenal ulcers.
    • Gastric cancer
      • H.pylori increases te patient’s risk for gastric cancer by almost 100-fold. It is influenced by the strain of H.pylori (cagA positive), and the host’s response (Increased IL-1 production)
    • MALT Lymphoma
      • Monoconal population of B cells may deveope and evolve into a MALToma in a small subset of individuals. Not considered a cancer per se.
  • Briefly describe the laboratory features of Helicobacter pylori
    • Specimen: Stool, Blood, Biopsy
    • Non-invasive procedures
      • Microscopy: GN comma shaped rods (difficult to visualize + non-pathogenic organisms may be present)
      • Stool Antigen test: positive (95% specificity and sensitivity, easy, inexpensive, active infection, monoclonal is useful before and after treament, polyclonal is done for only a few studies)
      • Blood Antigen test: positive (Is qualititave and quantitative IgG, Widely available, inexpensive, not useful after treatment. Note that IgM disappears rapidly, IgA and IgG can persist for months to years)
      • Urea breath test: positive (Patients drinks urea radio-labelled solution {13C or 14C small radiation tube} then blows into a tube, Detection of CO2 is positive. It is relatively expensive {cost of detection instruments})
      • PCR: expensive, not widely available or standardized
    • Invasive procedures
      • Endoscopy and biopsy: 100% sensitivity and specificity, is considered diagnositc
        • Biopsy in urea solution: alklaline byproduct detected may change wthin miniute-2hours, specificity is 100%
        • Histology (Warthin-starry silver stain): 100% sensitivity and specificity, diagositic
      • Culture: Difficult to isolate in culture and identified by biochemical testing and nonculture techniques
        • Specimen is gastric biopsy. Complex media supplemented with blood, serum, charcoal, starch, or egg yolk in microaerophilic (low O2, High CO2) for up to 2 weeks), temperature range is 30-37 degree.
    • Biochemical tests
      • Oxidase: Positive
      • Catalase: Positive
      • Urease: Positive
  • How is Helicobacter pylori infection treated ***treatment is conserved for symptomatic individuals since 2.3 or 50% of population has H.pylori commensals
    • Triple therapy: PPI (osemeprazole) + Clarithromycin + Amoxicillin/Metronidazole. 10-14 days. Compliance is important. OR PPI + metronidazole + tetracycline
    • Quadruple therapy: PPI + Bismuth subsalicylate + Metronidazole + Tetracycline
    • Antibiotic resistant bacteria: associated with clarithromycin resistance +/- metronidazole

Campylobacter

  • Briefly describe Campylobacter
    • Campylobacter is derived from the word kampylos” meaning curved rod.
    • It is a small (0.2-0.5um wide, 0.5-5um long), curved, gram negative rod that is comma or S-shaped or Cigar shaped.
    • It is non-sporing and motile and exhibits rapid motility (darting, in cork-skrew fashion) due to its flagella (1-2)
    • It is microaerophilic (candle extinction jar of CO2) and oxidase positive.
    • The cell wall has LOS instead of LPS endotoxin.
    • The major pathogens are:
      • Campylobacter jejuni (80-90% illnesses, >50 capsular serotypes)
      • Campylobacter festus (Systemic infections – bacteremia, septic thrombophlebitis, arthritis, septic abortion, and meningitis),
      • Campylobacter coli (Gastroenteritis),
      • Campylobacter upsaliensis (incidence unknown, GI infection)
    • Campylobacter shares similarities with Vibrio and Helicobacter (cork-screw motiliy, microaerophilic)
    • Campylobacter is found in the GIT of poultry, cattle, sheep, pigs, birds, dogs, and cats (on illnesses)
    • Transmission to humans is through contaminated food (water and milk), contaminated poultry (>50% infections in developed countries) and fecal-oral (fecal material from infected animals), food handlers (uncommon).
    • It is common in infants and young children with a 2nd peak in 20-40y adults. 1.4-2 million infection are estimated to occur anually in the US (more common than Salmonella and Shigella infections)
    • Incidence is higher in developing countries and it is the most common bacterial cause of diarrhea.
  • List the virulence factors associated with Campylobacter jejuni
    • S proteins (proteinaceous, capsule-like, prevents complement-mediated killing and opsonisation – phagocytosis)
    • Heat-labile enterotoxin (Cholera-like enterotoxin that causes diarrhea)
  • Briefly describe the pathogenesis of enteritis caused by Campylobacter jejuni
    • Risk of disease influenced by infectious dose
    • Ingestion (Contaminates milk, water, or Fecal-oral)
    • Colonization
    • Infection of Jejunum +/ ileum, colon, rectum
      • Ulcerated mucosal surfaces, edematous, bloody w/crypt abscesses in epithelial glands and inlitration of the lamina propria with neutrophils, mononuclear cells and eosinophils (C.jejuni infection)
    • Involvement of mesenteric nodes and transient bacteremia
  • Outline the clinical features of Campylobacter jejuni
    • Acute enteritis: Diarrhea, Fever + Severe abdominal pain. ≥10 bowel movements per day during the pek of the disease. Stool may be bloody. Self—limited. Symptoms may last > a week or longer
    • Bacteremia: (secondary to diarrhea), Risk is associated with pregnancy, HIV, Extremes of age, alcoholism ,post-splenectomy status and other immunosuppressive status
    • Cholecystitis
    • Arthritis
    • Deep abscesses
    • Osteomyelitis
    • Meningitis
    • C.festus: affinity for genital tract and tropism for fetal tissue. Causes perinatal infection, abortion, still birth, and premature labour.
  • List the immune-related complication associated with Campylobacter jejuni
    • Guillain-Barre Syndrome: Rare (1 in 1000 infections) Campylobacter jejuni serotype O:19 has antigen cross-reactivity between surface LOS and peripheral nerve gangliosides. Causes an ascending paralysis.
    • Reactive arthritis (Reiter’s syndrome): Joint pain, swelling of the hands, ankles, knees; persisting from 1 week to several months, unrelated to the severity of diarrheal disease, More common in individuals with HLA-B27 phenotype
    • Hemolytic uremic syndrome
    • Toxic megacolon
    • Cholecystitis
    • Meningitis
  • Briefly describe the laboratory features of Campylobacter jejuni
    • Specimen: stool
    • **Direct (**phase contrast or darkfield) microscopy: Darting motility like vibrio (on Phase contrast or dark-field microscopy)
    • Culture: ***On campylobacter special media. Microaerophilic (5-7% O2 and 5-10% CO2) and elevated incubation temperatures (42C) on selective agar. Slow growing (incubate 48H or longer) ***differentiate from vibrio by temperature, atmospheric conditions and media used
      • Skirrows media (BA with antibiotics vancomycin, trimethroprim, cephalothin, polymyxin, amphotericin B to inhibit other enteric organisms): Non-hemolytic, spreading, droplet-like colonies
      • Butzlers medium
      • Campy BA
      • Brucella antigen base with sheep blood
    • Gram stain: Gram ngative comma or S-shaped or Cigar shaped bacilli
    • Biochemical tests
      • Oxidase: Positive
      • Catalase: Positive
    • Serotpying
    • Biotyping
    • Phage typing
    • Antibody detection: IgG and IgM for epidemiological surveys
    • Nucleic acid based tests: For Campylobacter jejuni and Campylobacter coli
  • How is infection with Campylobacter jejunitreated
    • Self-limiting: rehydration
    • Severe dysentery: erythromycin, azithromyin, ciprofloxavin
    • Severe disease and septicemia: macrolides, tetracyclines, aminoglycosides, CAF, FQs, clindamycin, amoxicillin/clavulanic acid, and imipenem
    • Resistance: Penicillins, cephalosporins, sulfonamides +/- FQs
    • Systemic infections: aminoglycoside, chloramphenicol, imipenem
    • C.coli: TMP-SMX
    • Antimotility drugs: not recommended
Reference Intervals
Biochemistry
ACTHP: <80 ng/L
ALTP: 5–35 U/L
AlbuminP: 35–50 g/L
AldosteroneP: 100–500 pmol/L
Alk. phosphataseP: 30–130 U/L
α-AmylaseP: 0–180 IU/dL
α-FetoproteinS: <10 kU/L
Angiotensin IIP: 5–35 pmol/L
ADHP: 0.9–4.6 pmol/L
ASTP: 5–35 U/L
BicarbonateP: 24–30 mmol/L
BilirubinP: 3–17 μmol/L
BNPP: <50 ng/L
CRPP: <10 mg/L
CalcitoninP: <0.1 mcg/L
Calcium (ionized)P: 1.0–1.25 mmol/L
Calcium (total)P: 2.12–2.60 mmol/L
ChlorideP: 95–105 mmol/L
CholesterolP: <5.0 mmol/L
VLDLP: 0.128–0.645 mmol/L
LDLP: <2.0 mmol/L
HDLP: 0.9–1.93 mmol/L
Cortisol AMP: 450–700 nmol/L
Cortisol MidnightP: 80–280 nmol/L
CK ♂P: 25–195 U/L
CK ♀P: 25–170 U/L
CreatinineP: 70–100 μmol/L
FerritinP: 12–200 mcg/L
FolateS: 2.1 mcg/L
FSHP: 2–8 U/L ♂; >25 menopause
GGT ♂P: 11–51 U/L
GGT ♀P: 7–33 U/L
Glucose (fasting)P: 3.5–5.5 mmol/L
Growth hormoneP: <20 mu/L
HbA1C (DCCT)B: 4–6%
HbA1C (IFCC)B: 20–42 mmol/mol
Iron ♂S: 14–31 μmol/L
Iron ♀S: 11–30 μmol/L
Lactate (venous)P: 0.6–2.4 mmol/L
Lactate (arterial)P: 0.6–1.8 mmol/L
LDHP: 70–250 U/L
LHP: 3–16 U/L
MagnesiumP: 0.75–1.05 mmol/L
OsmolalityP: 278–305 mosmol/kg
PTHP: 0.8–8.5 pmol/L
PotassiumP: 3.5–5.3 mmol/L
Prolactin ♂P: <450 U/L
Prolactin ♀P: <600 U/L
PSAP: 0–4 mcg/mL
Protein (total)P: 60–80 g/L
Red cell folateB: 0.36–1.44 μmol/L
Renin (erect)P: 2.8–4.5 pmol/mL/h
Renin (recumbent)P: 1.1–2.7 pmol/mL/h
SodiumP: 135–145 mmol/L
TBGP: 7–17 mg/L
TSHP: 0.5–4.2 mU/L
T4P: 70–140 nmol/L
Free T4P: 9–22 pmol/L
TIBCS: 54–75 μmol/L
TriglyceridesP: 0.50–2.3 mmol/L
T3P: 1.2–3.0 nmol/L
Troponin TP: <0.1 mcg/L
Urate ♂P: 210–480 μmol/L
Urate ♀P: 150–390 μmol/L
UreaP: 2.5–6.7 mmol/L
Vitamin B12S: 0.13–0.68 nmol/L
Vitamin DS: 50 nmol/L
Arterial Blood Gases
pH7.35–7.45
PaCO₂4.7–6.0 kPa
PaO₂>10.6 kPa
Base excess±2 mmol/L
Urine
Cortisol (free)<280 nmol/24h
Hydroxyindole acetic acid16–73 μmol/24h
Hydroxymethylmandelic acid16–48 μmol/24h
Metanephrines0.03–0.69 μmol/mmol cr.
Osmolality350–1000 mosmol/kg
17-Oxogenic steroids ♂28–30 μmol/24h
17-Oxogenic steroids ♀21–66 μmol/24h
17-Oxosteroids ♂17–76 μmol/24h
17-Oxosteroids ♀14–59 μmol/24h
Phosphate (inorganic)15–50 mmol/24h
Potassium14–120 mmol/24h
Protein<150 mg/24h
Protein/creatinine ratio<3 mg/mmol
Sodium100–250 mmol/24h
Haematology
WCC4.0–11.0 ×10⁹/L
RBC ♂4.5–6.5 ×10¹²/L
RBC ♀3.9–5.6 ×10¹²/L
Hb ♂130–180 g/L
Hb ♀115–160 g/L
PCV ♂0.4–0.54 L/L
PCV ♀0.37–0.47 L/L
MCV76–96 fL
MCH27–32 pg
MCHC300–360 g/L
RDW11.6–14.6%
Neutrophils2.0–7.5 ×10⁹/L (40–75%)
Lymphocytes1.0–4.5 ×10⁹/L (20–45%)
Eosinophils0.04–0.44 ×10⁹/L (1–6%)
Basophils0–0.10 ×10⁹/L (0–1%)
Monocytes0.2–0.8 ×10⁹/L (2–10%)
Platelets150–400 ×10⁹/L
Reticulocytes0.8–2.0% / 25–100 ×10⁹/L
Prothrombin time10–14 s
APTT35–45 s
Paediatric
Pulse Rate (bpm)
Neonate140–160
Infant <1yr120–140
1–5 years110–130
5–12 years80–120
>12 years70–100
Respiratory Rate (tachypnoea)
0–2 months≥60/min
2–12 months≥50/min
1–5 years≥40/min
>5 years≥30/min
Blood Pressure (mmHg)
Term65/45
1 year75/50
4 years85/60
8 years95/65
10 years100/70
Weight Formulas
3–12 months(a + 9)/2 kg
1–6 years2a + 8 kg
>6 years(7a − 5)/2 kg
Haemoglobin (g/dL)
Term newborn13–20
1 month11–18
2 months10–15
1–2 years10–13
>2 years11–14
MUAC (6 months–5 years)
Obese>17.5 cm
Normal13.5–17.4 cm
At risk12.5–13.4 cm
Moderate malnutrition11.5–12.4 cm
Severe malnutrition<11.5 cm
Developmental Milestones
Social smile1.5 months
Head control4 months
Sits unsupported7 months
Crawls10 months
Stands unsupported10–12 months
Walks12–13 months
Talks18 months
CSF WBC (/mm³)
Term newborn0–25
>2 weeks0–5
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